
BiSSE

Phylomap

Slowdown test

Map occurences

Matrix Explorer

Discrete character correlation

Cophylo

Plot tree using d3

Stochastic character mapping using simmap

Phylogenetic independent contrasts

Lineage-through-time plots

PGLS - two variables only (for now!)

Ancestral state reconstruction
Reconstruct character evolution on a phylogenetic tree.

Phylogenetic signal