compareTrees : function

collection: phylogeny

Overview

Compares the topology of two phylogenetic trees using the function phylo.diff from the R package distory.

Example

Arguments

• t1: An input phylogenetic tree
• t2: Another input phylogenetic tree

Outputs

• treeComparePlot: A plot showing all non-matching branches between the two trees.

References

Chakerian, J. and Holmes, S. P. Computational Tools for Evaluating Phylogenetic and Heirarchical Clustering Trees. arXiv:1006.1015v1.